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RNA-seq quantitation program rQuant source code release

We released the source code of rQuant, a tool for transcript quantitation from RNA-seq experiments.

We have developed a tool for accurate RNA-seq-based transcript quantitation that simultaneously estimates the effect of experimental biases.

More information about rQuant can be found on the project website. The online version rQuant.web is available at our Galaxy server.

If you use rQuant in your research you are kindly asked to cite the following publications:

[1] Bohnert, R and Rätsch, G (2010): rQuant.web: a tool for RNA-Seq-based transcript quantitation, Nucleic Acids Research, 38(Suppl 2):W348-51.

[2] Bohnert, R, Behr, J, and Rätsch, G (2009): Transcript quantification with RNA-Seq data, BMC Bioinformatics, 10(S13):P5.

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