ARCHIVE Snapshot of the Rätsch lab website (Tübingen, then New York) as of February 2016: preserved, not maintained. The group today: bmi.inf.ethz.ch
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Genes and Predictions

Set of genes and exons predicted by RASE. Predictions were generated by Regina.

Document ._info_seq2_final.txt
 
File RASE1_predictions.txt
Unique list of exons that are predicted by RASE1 to be alternatively spliced. These exons are known to exist (but not that they can be skipped).
File RASE_train_genes.txt
Unique list of genes that show evidence for alternative exon skipping. These genes have been used for training RASE.
File RASE1_predicted_genes.txt
Unique list of genes that are predicted by RASE1 to contain an alternatively spliced exon. These exons are known to exist (but not that they can be skipped).
File RASE2_predictions.txt
Unique list of exons that are predicted by RASE1 to be alternatively spliced. These exons are known to exist (but not that they can be skipped).
File RASE2_predicted_genes.txt
Unique list of genes that are predicted by RASE2 to contain an alternatively spliced exon. Those exons are not yet known to exist. Some exon positions still seem wrong.
Document RASE2_predictions.html
Unique list of exons that are predicted by RASE1 to be alternatively spliced. These exons are known to exist (but not that they can be skipped). Output generated by Cheng.
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